1Department of Marine Science and Technology, Faculty of Fisheries and Marine Sciences, IPB University, Indonesia
2Leibniz Centre for Tropical Marine Research (ZMT), Bremen, Germany, Germany
3Department of Marine Ecology, Faculty of Biology and Chemistry, University of Bremen, Germany
4 Department of Marine Science and Technology, Faculty of Fisheries and Marine Science, IPB University, Indonesia
5 Oceanogen Environmental Biotechnology Laboklinikum, Indonesia
BibTex Citation Data :
@article{IK.IJMS40536, author = {Beginer Subhan and Dietriech Bengen and Sebastian Ferse and Fauzan Dzulfannazhir and Luzmi Izza and Nurlita Anggraini and Prakas Santoso and Dondy Arafat and Lalu Sani and Hawis Madduppa}, title = {DNA barcoding of the soft coral, Clavularia inflata, shows two major groups across Indonesian coral reefs}, journal = {ILMU KELAUTAN: Indonesian Journal of Marine Sciences}, volume = {27}, number = {1}, year = {2022}, keywords = {Molecular taxonomy; Phylogeny; Octocorallia; DNA Barcoding}, abstract = { Clavularia inflata was first described from Ternate Island, Indonesia in 1896 and later reported appeared from Japan and Taiwan in 1953.Clavularia (Blainville 1830) soft corals exhibit complex morphological traits that are difficult to differentiate, thus complicating their identification. DNA barcoding has been envisioned and actively pushed as a credible method for assigning unidentified specimens to known species by comparison to a molecular reference data database. Thus, the purpose of this study was to use molecular methods to confirm the identity of 25 colonies taken from 13 Indonesian coral reef sites and putatively identified as Clavularia inflata. All specimens were identified as Clavularia inflata molecularly using the mitochondrial DNA mtMuts gene. Although a comparison of the nucleotide base chains to Genbank data indicates that the samples belong to a single species, two clades in the phylogenetic tree and data from the Automatic Barcode Gap Discovery (ABGD) indicate that there are two major groups of C. inflata in Indonesia, implying cryptic species. }, issn = {2406-7598}, pages = {1--12} doi = {10.14710/ik.ijms.27.1.1-12}, url = {https://ejournal.undip.ac.id/index.php/ijms/article/view/40536} }
Refworks Citation Data :
Clavularia inflata was first described from Ternate Island, Indonesia in 1896 and later reported appeared from Japan and Taiwan in 1953.Clavularia (Blainville 1830) soft corals exhibit complex morphological traits that are difficult to differentiate, thus complicating their identification. DNA barcoding has been envisioned and actively pushed as a credible method for assigning unidentified specimens to known species by comparison to a molecular reference data database. Thus, the purpose of this study was to use molecular methods to confirm the identity of 25 colonies taken from 13 Indonesian coral reef sites and putatively identified as Clavularia inflata. All specimens were identified as Clavularia inflata molecularly using the mitochondrial DNA mtMuts gene. Although a comparison of the nucleotide base chains to Genbank data indicates that the samples belong to a single species, two clades in the phylogenetic tree and data from the Automatic Barcode Gap Discovery (ABGD) indicate that there are two major groups of C. inflata in Indonesia, implying cryptic species.
Article Metrics:
Last update:
Coral Communities Distribution in the Context of Site’s Reef Formation Type in Wakatobi National Park, Indonesia
Last update: 2024-12-25 20:51:21
Copy this form and after filling it, please send it to ijms@live.undip.ac.id:
COPYRIGHT TRANSFER STATEMENT
When this article is accepted for publication, its copyright is transferred to ILMU KELAUTAN Indonesian Journal of Marine Sciences, UNDIP. The copyright transfer covers the non exclusive right to reproduce and distribute the article, including reprints, translations, photographic reproductions, microform, electronic form (offline, online) or any other reproductions of similar nature.
The author warrants that this article is original and that the author has full power to publish. The author signs for and accepts responsibility for releasing this material on behalf of any and all co-authors. In regard to all kind of plagiarism in this manuscript, if any, only the author(s) will take full responsibility. If the article is based on or part of student’s skripsi, thesis or dissertation, the student needs to sign as his/her agreement that his/her works is going to be published.
Title of article :...........................................................................................................................Name of Author(s) :...........................................................................................................................Author’s signature :...........................................................................................................................Date :...........................................................................................................................
View My Stats
